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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66910466, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.41
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLGVIFTLL LFPGVTTGIN VICTYPRYVV IMFQPVTLRC DFTTTSTTPP LITWKYKSYC  60
   61 RDPIQAALNP SSADNAIAQS NPNYNPNIEC ADSARTVRIV ASKQTAVTLG KEYQGRQISI 120
  121 TNNADLSIVQ TAWGDSGVYV CSAASAQDLS GNGECYTELI VLDWLLVVLV VLGFLLLLLL 180
  181 IGICWCQCCP HTCCCYVRCP CCPERCCCPR ALYEAGKMVK SGIPSQYAAT AYAQSMYGQP 240
  241 AYGVGAAMPG IPMMPMQMGV GGPPSNGYGR DYDGASSIGQ GSQVPLLQEH DAGGNRSGYR 300
  301 VQADQDGNPT RVLYYMEREV ANLDPSRPGI APVDGMSEVS SLHDGPESRN RGRARPPQLT 360
  361 TVYDDVDENM STISSVSQHM RRDEPRRGAD SRGRARSMEN LDDISRGYRD RDDYPPARRD 420
  421 GGPRGGRRGS DDEWSSSGRG YDPVDDRRRR DYSPDNRPRR GDSFRGAGFQ GRRTRSRDDL 480
  481 MDLVRDPGRG GRDEYDDSFL REAMEKKKLG EQQRGRSRER LDSESDRSDR YRGHHSGPPP 540
  541 LPLVPASGNP DRRGNHSNFP PPPPPYTEDT DSLPSSKKSN LKKNGAVSRE SLVV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle