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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149038629, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVGGLLPLF SSPGGGGLGG GLGGGLGGGR KGSGPAAFRL TEKFVLLLVF SAFITLCFGA  60
   61 IFFLPDSSKL LSGVLFHSNP ALQPPAEHKP GLGARAEDAA EGRVRHREEG VPGDPGAGLE 120
  121 DNLARIRENH ERALREAKET LQKLPEEIQR DILLEKEKVA QDQLRDKDLF GGLPKVDFLP 180
  181 PIGVENREPA DATIREKRSK IKEMMAHAWN NYKRYAWGLN ELKPISKEGH SSSLFGNIKG 240
  241 ATIVDALDTL FIMGMKTEFQ EAKSWIKKYL DFNVNAEVSV FEVNIRFVGG LLSAYYLSGE 300
  301 EIFRKKAVEL GVKLLPAFHS PSGIPWALLN MKSGIGRNWP WASGGSSILA EFGTLHLEFM 360
  361 HLAHLSGNPV FAEKVMNIRT VLNKLDKPEG LYPNYLNPSS GQWGQHHVSV GGLGDSFYEY 420
  421 LLKAWLMSDK TDLEAKKMYF DAVQAIETHL IRKSSGGLTY IAEWKGGLLE HKMGHLTCFA 480
  481 GGMFALGADG APEARAQHYL ELGAEIARTC HESYNRTYVK LGPEAFRFDG GVEAIATRQN 540
  541 EKYYILRPEV IETYMYMWRL THDPKYRTWA WEAVEALESH CRVNGGYSGL RDVYIAHESY 600
  601 DDVQQSFFLA ETLKYLYLIF SDDDLLPLEH WIFNTEAHPF PILRDQKKEV DVQEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle