YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56207457, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.76
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDMLHFYEWI DIKSILIFVC VFLLLSDFIK NKTPKNFPPG PWSLPIIGDI HHIDPSKLHL  60
   61 QLSEFAEKYG KIFSLRLFGP RIVVLNGYNL VKEVYTQEGD NLADRAILPL FHDIIGDKGL 120
  121 VASSGYKWKQ QRRFALSTLR NFGLGKKNLE PSINLESGFL NEAISNEQGQ PFDPRLLLNN 180
  181 AVSNVICALV FGNRFDYSDH KFQTLLKNIN ETVHLEGGIC AQLYNMLPWL MRLLPGPHKR 240
  241 IIALWGKLIE FVGEKVNEHK VDHDPLNPRD YIDCFLDEME KHKDDTAAGF DVENLCICTL 300
  301 DLFVAGTETT STTLYWGLLY MMKYPEIQAK VQQEIDVIVG GSRQPSVSDR DNMPYTNAVI 360
  361 HEIQRMGNII PINLARTTSE DTQIEKYSIP KGTMVTSNLT SVLFDESEWE TPHSFNPGHF 420
  421 LDAEGKFRRR DAFLPFSLGK RVCLGEQLAR MELFLFFSSL LQRFTFSPPA GVEPSLDYNL 480
  481 GATHCPQPYK LCAVPH

Type	Start	End	Confidence
Cytoplasmic	1	8	0.66
Transmembrane Helix	9	29	0.70
Non-Cytoplasmic	30	496	0.93