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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|55962354, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTVFLLGFL LFYQSWAFEF IIDGEWESEM SDPLDHHHDS GRYRRNVLTS GEEEEDFVAI  60
   61 QGNDITVKSY KVESKITSRF AHTKVKSSVV NSGLQAQSIG FNVQIPKRAF INNFTMNVNG 120
  121 ITFVGSVKEK TVARNLYAQA RARGKAAGIV RTNSQAMETF RTEVHVPAGS KVEFELHYQE 180
  181 LMQRKLGIYQ HTLHIQPGRL VPLLQVDVYI FEPKGIKFVT APNTLGKQFE DLTTITHTKE 240
  241 KAHIVFKPNL QQQRKCENCT ESAVDGVFTV TYDVERETNA GELQVSDGHF VQFFAPSDLT 300
  301 PLSKNIVFVI DVSGSMWGLK MKQTVEAMKA ILDDLSIDDY FSIIDFNHNV RCWSEDLVQA 360
  361 SSIQVDEAKK YIQNIKPNGG TNINEALLRA IQMLIKASHH GLIDPRSVSM IILVSDGDPT 420
  421 VGEIKLSTIQ KNVKLRMKEE FSLFSLGIGF DVDFDFLERI AMDNRGIAQR IYANQNAAEQ 480
  481 LKTFYSQVSS PLLRTITIHF PENTVNNVTQ NRFDKFFSGS ELIVAGKLQP SDLTTLQSFI 540
  541 TASAANMDLN IQAEADIQAL DTVLSRHQHS YNDFARQMWG YITVNQLLAE RSLARTASRK 600
  601 RKITQRIVAL AVEHQFVTPL TAMLVESNEE GRPERLIADS PKDSKHGCCS ATGSLSGQMP 660
  661 VQRLVYQNPP WILPTPGPTF VAEAVGSQES IIPVHITGVD SDPHFIINLP KSNMDICFNI 720
  721 DSKPGHILNL ISDPGTGVTV NGQLIGSKML KNNKLNTYFG TISIYSKTDG VQVIVGTDRI 780
  781 DLMESKNNHS FSWGATAELT LNRIKVTILK EQHVTVLIDG RISVMVLLHR VWKKHPVQVD 840
  841 FLGIYMSNNN KYSTQVHGLV GQFAKEPEVK VYDVHEGADP KKKEATMEVK GNKLAVTRGW 900
  901 QKDYRRDRKR GSDIYCWFVH NNGKGFVDGN YTNYILPQLD SFLIAL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle