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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|55962862
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGAQERTVRA PGVCPSLLRF LRLRFTPESL EKIYQTYFLR QRQETLLVLI VFAALFNGYV  60
   61 IIMCAVVYSP DKLNTLAVAA GGLASDILLY ITSRFRLLPV HVSACLVPYA LWLLIMVHVL 120
  121 CYFSLNFAGF YAAGDTVGWQ TFFIFSFFLT LPLPLAPIVL LSVFSCCAHT LLLGFTISLR 180
  181 NQDKLQLSVL IRQLVANLML YFGAMLVGVM SYFMADRKYR TAFLEAKQSL EVSLTLKEQS 240
  241 QQQEELLLSI LPKHIADEML QGMKKGANQK TDAQQFNTMY MYRHEDVSIL FADIVGFTQL 300
  301 SSAVTPKELV KVLNELFARF DKLAAQHHQL RIKILGDCYY CICGLPDYRE DHAACSIMMG 360
  361 LSMVEAISYV REKTQTGVDM RVGVHSGTVL GGVLGQKRWQ FDVWSTDVTV ANKMESGGIP 420
  421 GRVHISQSTK DCLHDEFELE EGNGGERCDY LLEKGIDTYL VVMAKETAKT NGVGNGTVIN 480
  481 TSGSSTSVKN TAEESETQHL QLPSITEEGM EEEHLNLLSK TLLEREAEEI LEEKKTSALS 540
  541 LRFEDPDLES RYSAEKERQT GVAFSCCCAV LIFTSAMEIL IDPQLIVNYV TLAIGELLLL 600
  601 ILTLCSLAAV FPRVFSRRLV SFSQWIDRTR WARNTWAMAA IFVLTMAEVA DMLSCVQPPL 660
  661 LLLNSSSGVT LESLGNGGCA ENPKHYGYIS VLSLVATVML VQLSHVVKLA LMLLVTIATG 720
  721 AVNIHSWMYI YDIYDFIRYL DYRYSVVPTR YLLTVMIIIM MLGFYYFARH VERQSRKLFL 780
  781 WKIEVTDQKE KVYEMRTYNE ALVTNMLPEH VAKHFLGSKK RDEELYSQSY DEIGVMFASI 840
  841 PNFSDFYTEE SINNGGLECL RILNEIISDF DSLLDRTEFR HITKIKTIGS TYMAASGVTP 900
  901 ESNTNGYADR KIEDQSLLDR WQHFADLADF ALAMKVMLGN LNKQSFNNFM LRIGLNKGSV 960
  961 LAGVIGARKP HFDIWGNTVN VASRMESTGV MGNIQVVEDC YNILKEYGFR FVRRGPIYVK1020
 1021 GKGELLTFFM KGKDPVEKTN GMTLPHQIQG KS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle