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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56207727
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KRAAQEASLT WCCWRVMQED EDLLQIWIVG LKELSTMKAD VSQYVLPTDT ALLQGQVEEL  60
   61 HCQWEELCLK VSLRKQEIAD RLNAWIIFND KNKELCDWLT QMEKKVAHRG ENLSIEEMVE 120
  121 KLKKDCMEEI NLFSENKSHL KQLGEQLLLA SDKAKETEIH GALRDVNDRW QQLFDHIEGR 180
  181 GKKLTETLVT VQQLDKNMNN LRSWLTRIEA ELSKPVHYSI CHREEIQKRL AEQQDLQRDI 240
  241 EQHTERVASV LTLCDVLLHD EDACSSDGEN DSIQQTTQRL DQRWRNICSM SLERRLRIEE 300
  301 TWRLWCKFQE DYSCFEDWLN AAERTAAEPN SSDVSYTDAK EELHKYEVFQ MRVHESLTQL 360
  361 EIINNQYRRL AWENRTDAAS RLRAMVHQGN QRWDALQRRV AAILRRLRHF TGQREEFEGT 420
  421 RESLLVWLTE IELQLTDMEH FSESHHQDRM KQLKSFKKEI TLNTNKIDAL IVFGEGLIQR 480
  481 SAPLDAVVIE DELEELHTYC QEVFGRVARF HQRLTSLRPL QEHPDVYDGE RSRETQSPPS 540
  541 SSQPSMCLLS PPQERSGRET PVSVDSIPLE WDHTGDVGGS SSHDEEEEDA AFFSALSGQN 600
  601 WHFQNMPERK SFQLESSSPT HTSTPFKQGY VQLMSECSGS IKSVKRVSMI LDDEEQQEEQ 660
  661 GLTGLNTADK QSGVIERWEL LQAQAVSKEQ CRTRDPQQLT SDLHDITSWL DCITLELDML 720
  721 QRPETSASVE VLEERVKQLK EMQKTFARYK TMMLSLNLCG RELQQEASGG APELQEGLHS 780
  781 MNQRWTEACA GLERWEDSLR NTLVRCQEFH EMVHSLLLWL AHAESRRYAV NMNDASVQLS 840
  841 TLQEHTQTLK DLAVDLQGRQ KQVNSLQDIA SELLPEAGGE DSTEAKEKLH VIGSKLRLLS 900
  901 RQVEQDLQTI QERLGSTTDA SGDQKSPECS RWNGEPSPQR SFFYRVLRAA FPLHLLFLLL 960
  961 LVLACLVPLS EDDYSCTLSN NFARSFHPML RYTNGPPPT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle