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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: OTOF_DANRE
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALVVHLKTV TELRGKGDRI AKVTFRGLSF FSRVLENCED EARFEQAFRW PIGSQVDGDE  60
   61 MLEIQVFNYS KVFTNRLIGT FRMVLQKVVE EGHLEVSDTL IDDNNTAIQT TISIEIKYQT 120
  121 MDGSVKVWSD GEFLDIPDDL DGTFQFETDS LLSGRSQSSG TSPGRSIHGI PTFRKAGKGV 180
  181 FSAMKLGKTR TSKDDHKKGD DAAILDAEDL DRKAMRLGGI LDPDTISLAS VTAVTTNVSN 240
  241 KRSKPDIKME PSSGRPVDYQ ISVTVIEARQ LVGLNMDPVV CVEIGEEKKY TSMKESTNCP 300
  301 YYNEYFVFDF HVPPDVMFDK IIKISVIHSK NLLRSGTLVG TFKLDVGTVY TQPEHQFHHK 360
  361 WAMLSDPDDI TTGCKGYVKC DIAVVGKGDN IKTPHKASEA DEDDIEGNLL LPEGVPSERQ 420
  421 WARFYVKIYR AEGLPKMNTS IMANVKKAFI GENRDLVDPY VLVQFAGQKG KTSVQKSSYE 480
  481 PIWNEQVIFT EMFPPLCRRL KVQIRDSDKV NDVAIGTHFI DLRKVSNDGD KGFLPTMGPA 540
  541 WVNMYGSTRN YTLMDEHQDL NEGLGEGVSF RARLLISIAV EILDTTSAEI MSSTEVHMEP 600
  601 VSNISESATG KMEEFFLFGS FLEATMIDRK IGDKPISFEV TIGNYGNQID GVSKPALAKK 660
  661 KKEGGGESEE EESELIHNSS EEEAEDDGDL TSVPSTPPMK PVITDRNYFH LPYFEKKPCI 720
  721 YIKSWWQDQR RRLYNSNIMD KIADKLEEGL NDVQEIIKTE KAYPERRLRG VLEELSTSCS 780
  781 RFVTLANKDQ NLSGRTKLDR ERLKSCMREM ESMGQQAKTI RTQVKRNTVR DKLKLVLNFL 840
  841 QRLRFLADEP QHSIPDVFIW MISNNKRIAY ARIPSKDILY SIVDEEMGKD CGKVKAVFLR 900
  901 LPGKKGFGPA GWTVQAKLEM YLWLGLNKQR KDFLIGLPSG FEENKAVKGI GIQAVPPISL 960
  961 VYNMKQVFQL RAHMYQARSL FAADTSGLSD PFARVFFSTH SQVTEVLSET LCPTWDQLLV1020
 1021 FDNVELYGEA GELRDDPPII VIELYDQDTV GKAEFIGRTF AKPLTKMVDE HYGPPRFPPQ1080
 1081 LEYYQIYRGN CAAGDLLAAF ELLQIGPAGR AALPPIDGPT DSDRGPILPV PLGIRPVLSR1140
 1141 YRIEVLFWGL RDLKRVNLAQ VDRPRVDIEC AGKGVQSALI QNYKKNPNFS TLVKWFEVDL1200
 1201 PENELLHPPL NIRVVDCRAF GRYILVGSHA VTTLRKFIYS PPDKTANNWA HTGDIVVNMS1260
 1261 PEPNIKKMDT VVKIEATTDA VVKVDLNEDE KEKEKKKKKK KKGEEVEEEE PDESMLDWWS1320
 1321 KYFASIETMM ENLRAQEAAQ AEAEEREDLE IAAESAEIKA DDFPMKGTKP KEKSKDKKST1380
 1381 KDKKKNNDGT EKRPPKPKVD ELMVYNKELE SEFGSFEDWL HTFNLYRGKA GDDDDHNVVD1440
 1441 EDRIVGRFKG SLCMYKLPLS EEITREAGFD PNMGMFQSIP HNDPINVLVR IYIIRATDLH1500
 1501 PADINGKADP YIVIKLGKSD IRDKENYISK QLNPVFGKSF DIEATFPMES MLTVAVYDWD1560
 1561 LVGTDDLIGE TKIDLENRYY SKHRATCGIA SNYSVHGYNV WRDPQKPAQI LAKLCKEGKL1620
 1621 DGPHYGPGGR VKVANRIFLG PTEIEDESGL KKQTEEHLAL TVLRHWEEIP RVGCKLIPEH1680
 1681 VETRPLLNPD KPGIEQGRIE MWVDMFPMDV PAPGPAIDIS PRKPKRYELR VIIWNTDEVI1740
 1741 LEDDDYFTGE KSSDIFVRGW LKGQQEDKQD TDVHYHSLTG EGNFNWRFVF PFDYLMAEEK1800
 1801 IVISKKESMF SWDETEYKIP ARLTLQVWDA DHFSADDFLG AIELDLNKFP RGAKTAKQCS1860
 1861 LDMVLKEHEL PTISIFKQKR VKGWWPFVAQ NENDEFELTG KVEAELHLLT AEEAEKSPVG1920
 1921 LGRNDPEPLE KPNRPDTSLM WFMNPLRSIR YFIWHNYRWL ILKALALLLL LLLVGLFLYS1980
 1981 IPGYLVKKLL GA

YRC Informatics Platform - Version 3.0
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