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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73853826, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAAHTKTTE ECLAYFGVNE NTGLSPEIVK KNFDKFGPNE LPAEEGKSIW ELVAEQFEDL  60
   61 LVRILLLAAC ISFVLAWFEE GEETVTAFVE PFVILLILIA NAVVGVWQER NAEDAIEALK 120
  121 EYEPEMGKVY RSDRKSVQRI KAREIVPGDI VEVAVGDKVP ADIRLISIKS TTLRIDQSIL 180
  181 TGESVSVIKH TEAVPDPRAV NQDKKNMLFS GTNVGAGKAI GVVIATGPNT EIGKIRDEMA 240
  241 ATEQEKTPLQ QKLDEFGEQL SKVISLICVA VWLINIGHFN DPIHGGSWIK GAIYYFKIAV 300
  301 ALAVAAIPEG LPAVITTCLA LGTRRMAKKN AIVRSLPSVE TLGCTSVICS DKTGTLTTNQ 360
  361 MSVCRMFVLD KVDGDICSLN EFSITGSTYA PEGEVLKNDK SVKAGQYDGL VELATICALC 420
  421 NDSSLDYNES KGVFEKVGEA TETALTTLVE KMNVFNTEVR SLSKVERANA CNSVIKQLMK 480
  481 KEFTLEFSRD RKSMSVYCTP AKASRAAVGN KMFVKGAPEG VIDRCNYVRV GTTRVPLTPA 540
  541 IKDKILTVIK EWGTGRDTLR CLALATRDTP PKREEMVLDD ATKFVDYETD LTFVGCVGML 600
  601 DPPRKEVMGS IKLCREAGIR VIMITGDNKG TAIAICRRIG IFGEDDDVSR CAFTGREFDD 660
  661 LPPTEQREAC KRASCFARVE PTHKSKIVEF LQSFDEITAM TGDGVNDAPA LKKAEIGIAM 720
  721 GSGTAVAKTA SEMVLADDNF STIVAAVEEG RAIYNNMKQF IRYLISSNVG EVVCIFLTAA 780
  781 LGLPEALIPV QLLWVNLVTD GLPATALGFN PPDLDIMDRP PRSPKEPLIS GWLFFRYLAI 840
  841 GGYVGAATVG AAAWWFMYAD DGPEVTFYQL SHFMQCTEEN ADFEGLECEI FESPVPMTMA 900
  901 LSVLVTIEMC NALNSLSENQ SLVRMPPWVN IWLLGSICLS MSLHFLILYV EPLPMIFKLT 960
  961 PLNFTQWFVV LKISIPVILL DELLKFVARN YLEA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle