YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TIM22_XENTR
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGSVSPPGT GEGTLQYSLI MEHLVGDKRR PKEVIPGGLG GIPTPIKSEE QKMMERVMES  60
   61 CGFKAALACV GGFVLGGAFG VFTAGIDTNV GFDPKDPYRT PTAKEVLKDM GQRGMSYAKN 120
  121 FAIVGAMFSC TECLVESYRG KSDWKNSVIS GCITGGAIGF RAGLKAGALG CGGFAAFSAV 180
  181 IDYYLR

Type	Start	End	Confidence
Cytoplasmic	1	60	0.99
Transmembrane Helix	61	84	0.90
Non-Cytoplasmic	85	161	0.73
Transmembrane Helix	162	185	0.78
Cytoplasmic	186	186	0.63