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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|87042748, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFHSCSLIL LAITWCTSAY GPDQRAQKKG DIILGGLFPI HFGVAAKDQD LKSRPESVEC  60
   61 IRYNFRGFRW LQAMIFAIEE INSSPALLPN MTLGYRIFDT CNTVSKALEA TLSFVAQNKI 120
  121 DSLNLDEFCN CSEHIPSTIA VVGATGSGIS TAVANLLGLF YIPQVSYASS SRLLSNKNQF 180
  181 KSFLRTIPND EHQATAMADI IEYFRWNWVG TIAADDDYGR PGIEKFREEA EERDICIDFS 240
  241 ELISQYSDEE EIQQVVEVIQ NSTAKVIVVF SSGPDLEPLI KEIVRRNITG RIWLASEAWA 300
  301 SSSLIAMPEY FHVVGGTIGF ALKAGQIPGF REFLQKVHPR KSVHNGFAKE FWEETFNCHL 360
  361 QEGAKGPLSM DTFLRGHEEG GGRISNSSTA FRPLCTGDEN ISSVETPYMD YTHLRISYNV 420
  421 YLAVYSIAHA LQDIYTCLPG RGLFTNGSCA DIKKVEAWQV LKHLRHLNFT NNMGEQVTFD 480
  481 ECGDLMGNYS IINWHLSPED GSIVFKEVGY YNVYAKKGER LFINEEKILW SGFSREMPFS 540
  541 NCSRDCLAGT RKGIIEGEPT CCFECVECPD GEYSDETDAS ACDKCPDDFW SNENHTSCIA 600
  601 KEIEFLSWTE PFGIALTLFA VLGIFLTAFV LGVFIKFRNT PIVKATNREL SYLLLFSLLC 660
  661 CFSSSLFFIG EPQDWTCRLR QPAFGISFVL CISCILVKTN RVLLVFEAKI PTSFHRKWWG 720
  721 LNLQFLLVFL CTFMQIVICV IWLYTAPPSS YRNHELEDEI IFITCHEGSL MALGFLIGYT 780
  781 CLLAAICFFF AFKSRKLPEN FNEAKFITFS MLIFFIVWIS FIPAYASTYG KFVSAVEVIA 840
  841 ILAASFGLLA CIFFNKVYII LFKPSRNTIE EVRCSTAAHA FKVAARATLR RSNVSRKRSG 900
  901 SLGGSTGSTP SSSISSKSNS EDPFPQPERQ KQQQPLALTQ REQQPPQPLT LPPQPQPRCK 960
  961 QKVIFGSGTV TFSLSFDEPQ KSAAAPRNST LQHSLEAQRS PEPPARPQAL LPPQGGDTDA1020
 1021 ELPAQEPGLQ GPGGADRRPE MRDPEELSPA LVVSSSQSFV ISGGGSTVTE NILHS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle