YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57753906
Protein type:	Globular with Signal Peptide
Type Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRLAVRRHP PSLSRLIRSQ KFMTDMSHQC VIVGIAGASA SGKSLIASTL YRELREQVGD  60
   61 EHIGVIPEDS YYKDQSHLSM EERVKTNYDH PSSMDHSLLF QHLQMLKSGQ PIELPVYSYV 120
  121 EHTRTPNTIH VEPKKVIILE GILLLTDARL RNELNFSIFV DTPLDICLMR RIKRDVNERG 180
  181 RSMDSVMAQY QKTVRPMFLQ FIEPSKQYAD IIVPRGGKNR IAIDILKAKI SQFFE

Type	Start	End	Confidence
Signal Peptide	1	40	0.55
N-region	1	31
H-region	32	37
C-region	38	40
Cleavage Site	40	41
Non-Cytoplasmic	41	235	0.98