YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DFP3_LONON
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGKFVLLAV LLVGVNSRYV IIEDPVYYIE DHELPEQWTS SRVRRDAHGA VTLNTDGTSG  60
   61 AVVKVPIAGS DKNIVSAIGS VDLTDRLKVG AATAGLAIDN VNGHGASITD THIPGFGDKL 120
  121 TAAGKINLIH NDNHDLTANA FATRNMPSIP LVPDFNTVGG GIDYMFKDKI GASASVAHTD 180
  181 LINRNDYSLG GKLNLFKTPD TSVDFNAGWK KFDTPVINSN WEPNFGFSLS KYF

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	233	0.99