YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ADT4_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNESSKKQS SKKALFDPVS FSKDLLAGGV AAAVSKTAVA PIERVKLLLQ VQASSKQISP  60
   61 EARYKGMLDC LVRIPREQGF LSYWRGNLAN VIRYFPTQAL NFAFKDKYKE LFMSGVNKEK 120
  121 QFWRWFLANL ASGGAAGATS LCVVYPLDFA RTRLGVDIGK GPEQRQFTGL GDCIMKIAKS 180
  181 DGLIGLYQGF GVSVQGIIVY RASYFGAYDT VKGLLPKPKE TPFLVSFIIA QIVTTCSGIL 240
  241 SYPFDTVRRR MMMQSGESDR QYKGTIDCFL KIYRHEGVPA FFRGAFSNIL RGTGGALVLV 300
  301 LYDKIKEFLN IDVGGSSSGD

Type	Start	End	Confidence
Cytoplasmic	1	124	0.67
Transmembrane Helix	125	147	0.68
Non-Cytoplasmic	148	222	0.57
Transmembrane Helix	223	244	0.90
Cytoplasmic	245	320	0.74