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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60203067, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLCLSPPVTY NLLFWFLILQ TPQSTAPLIT GTEASCENEG EVLHIPNITD NPCISCVCLN  60
   61 QKAECKQEKC APLAEDCALV VKQTGACCEK CKGCLLKGTS YNSSHHWISP VKPCVTYSCQ 120
  121 EGVITEAEMR CVIHCKNPKI HPKKCCPTCP GCIFEGIYIK KMKNFTLKGN PCIKCVCTGG 180
  181 QSMCHNWCVL FCPARLIFTH TPPGQCCPRC RGQRRVFDLS PGSCLFHSEV YENGSSISYD 240
  241 NCTTCTCVDS TVLCRKRCSP PGSCHGTACC EACQSLLKME DVKYCRVKSK IYRDGDRWSS 300
  301 VNCSLCTCVK GNIQCQPKIC VPITSCPSNK ILNRTGCCPV CTDKPGVCTV FGDPHYNTFD 360
  361 GRTFNFQGTC KYVLTKDCSP AASFTVLVKN DARRTRSFSW TKSVELHTSG LSISLHQHLT 420
  421 VRQNGTRIAL PFHSTGVHID LDGYLLKLTT IAGLEITWDG DSLVEVVAAP HLKGQLCGLC 480
  481 GNYNGQRRDD SLGGDGQFKF DVDELAESWR VEDNELCEVQ NRRPTSFLCA GTVKVKLRAH 540
  541 RTCQKLKSWG VSEVPSAVDF TSFYKSCVTD MCECPVHKNC FCESFIAYSR AREREGIHVH 600
  601 WRPELTCMST HCKHGAVYDT CGPGCTKSCH NWNEIGPCQR PCIAGCHCPA SLVMFQGHCI 660
  661 KPTSCPGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle