YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67970561
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLWPHQRWPH QPCSDCGHGV HQEDKHRVGL GVTMVHGNLT AGHGLLVELI ITFQLVFTIF  60
   61 ASCDSKRTDV TGSIALAIGF SVAIGHLFAI NYTGASMNPA RSFGPAVIMG NWENHWIYWV 120
  121 GPIIGAVLAG GLYEYVFCPD VELKRRFKEA FSKAAQQTKG SYMEVEDNRS QIETDDLILK 180
  181 PGVVHVIDID RGEEKKGKDQ SGEVLSSV

Type	Start	End	Confidence
Non-Cytoplasmic	1	38	0.94
Transmembrane Helix	39	61	0.87
Cytoplasmic	62	69	0.87
Transmembrane Helix	70	90	0.92
Non-Cytoplasmic	91	115	0.89
Transmembrane Helix	116	137	0.96
Cytoplasmic	138	208	0.98