YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109013523, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRVVLSAA ATAAPSLKNA AFLGPGVLQA TRTFHTGQPH LAPIPPLPEY GGKVRYGLIP  60
   61 EEFFQFLYPK TGVTGPYVLG TGLILYALSK EIYVITAETF TAMSLIGIMV YGIKKYGPTV 120
  121 AAYADKINEQ KLAQLEEAKQ SSIQQMQNAI DTEKSQQALT QKRHYLFDVQ RNNIAMALEV 180
  181 TYRERLYRVY KEVKSRLDYH IAVQNMTRRK EQEHMINWVE KHVVQSISAE QEKETVAKCI 240
  241 ADLKLLAKKA QAPLVM

Type	Start	End	Confidence
Signal Peptide	1	20	0.98
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	256	0.99