YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|79325105, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDLAKDAWR KYLIQLQAHP LRTKAITAGV LAGCSDAIAQ KISGVKRIQF RRLLLLMLYG  60
   61 FAYGGPFGHF FHKLMDTIFK GKKGNSTVAK KVLLEQLTSS PWNNFLFMSY YGLVVEGRPW 120
  121 KLVKHKLGKD YPTIQLTAWK FWPIVGWVNY QYVPLQFRVL FSSFVASCWS IFLNLKARSP 180
  181 VIKNA

Type	Start	End	Confidence
Cytoplasmic	1	49	0.90
Transmembrane Helix	50	71	0.86
Non-Cytoplasmic	72	153	0.92
Transmembrane Helix	154	173	0.90
Cytoplasmic	174	185	0.85