YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NDUAD_MACFA
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVAVCHFRL GPEVWNTASM EMPKVKQDMP PPGGYGPIDY KRNLPRRGLS GYSMLAIGIG  60
   61 TLVYGHWSIM KWNRERRRLQ IEDFEARIAL MPLFQAETDR RTLQMLRENL EEEAIIMKDV 120
  121 PDWKVGESVF HTTRWVPPLI GELYGLRTTE ETIHANYGFM WYT

Type	Start	End	Confidence
Cytoplasmic	1	47	0.71
Transmembrane Helix	48	70	0.88
Non-Cytoplasmic	71	163	0.73