YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67969107
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.40
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAPTLPPAW QPFLKDHRIS TFKNWPFLEG CACTPERMAE AGFIHCPTEN EPDLAQCFFC  60
   61 FKELEGWESD DDPIEEHKKH SSGCAFLSVK KQFEELTLGE FLKLDRERAK NKIAKETNNK 120
  121 KKEFEETAKK VRCAIEQLAA TDWGLWLELP GPRVVAPLPG FIPWCHQPSC GTLSNALGKE 180
  181 KINISQLDIS AVSCFVLKVA PEVLLPVQRV LLITVTASLS LFFFWLIFVF VIPGLTR

Type	Start	End	Confidence
Cytoplasmic	1	209	0.50
Transmembrane Helix	210	234	0.87
Non-Cytoplasmic	235	237	0.40