YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62320761
Protein type:	Transmembrane
Type Confidence:	0.67
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDTYDFQND IWLCHSTGGT CFNFTAFQPA INALKEINDF LESNLSEIVT IILEDYVKSQ  60
   61 MGLTNVFNAS GLSKFLLPIS RMPKDGTDWP TVDDMVKQNQ RLVVFTSKKD KEASEGLAYQ 120
  121 WNYMVENQYG NDGMKDGSCS SRSESSSLDT MSRSLVFQNY FETSPNSTQA CADNSSPLIE 180
  181 MMRTCHEAAG KRWPNFIAVD FYQRSDSGGA AEAVDEANGR LTCGCDSLVY CKSNAPFGTC 240
  241 DAPPPKSSPS PVSGGKDTSR KPRNLPAGNA DSTAIGLSSL VLISAATLLL W

Type	Start	End	Confidence
Cytoplasmic	1	267	0.53
Transmembrane Helix	268	289	0.61
Non-Cytoplasmic	290	291	0.75