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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62320755
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARWLLQILI ISSLHLSSVS SQQETSFVYE SFLDRQNLYL DKSAIVLPSG LLQLTNASEH  60
   61 QMGHAFHKKP IEFSSSGPLS FSTHFVCALV PKPGFEGGHG IVFVLSPSMD FTHAESTRYL 120
  121 GIFNASTNGS SSYHVLAVEL DTIWNPDFKD IDHNHVGIDV NSPISVAIAS ASYYSDMKGS 180
  181 NESINLLSGN PIQVWVDYEG TLLNVSVAPL EVQKPTRPLL SHPINLTELF PNRSSLFAGF 240
  241 SAATGTAISD QYILWWSFSI DRGSLQRLDI SKLPEVPHPR APHKKVSTLI ILLPVCLAIL 300
  301 VLAVLAGLYF RRRRKYSEVS ETWEKEFDAH RFSYRSLFKA TKGFSKDEFL GKGGFGEVYR 360
  361 GNLPQGREIA VKRVSHNGDE GVKQFVAEVV SMRCLKHRNL VPLFGYCRRK RELLLVSEYM 420
  421 PNGSLDEHLF DDQKPVLSWS QRLVVVKGIA SALWYLHTGA DQVVLHRDVK ASNIVLEAEF 480
  481 HGRLGDFGMA RFHEHGGNAA TTAAVGTVGY MAPELITMGA STGTDVYAFG VFMLEVTCGR 540
  541 RPVEPQLQVE KRHMIKWVCE CWKKDSLLDA TDPRLGGKFV AEEVEMVMKL GLLCSNIVPE 600
  601 SRPTMEQVVL YLNKNLPLPD FSPYTLGIGT FAPVLVDASS LVVSSASWSL SGPSMSSSSP 660
  661 NHSPYAWQST DQPWGQTIDT KNSLHIVAEP EKPSPAVKMV TLPAEDPQSN HSSISSQRVQ 720
  721 PVKREKRRLH QILVAFPWIN KQYFKLGLPK HIVHVSLFFF LQLARL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle