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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62319788
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATLQDIGVS AGINILSAFV FFIIFAVLRL QPFNDRVYFS KWYLKGLRSS PARGGAFAQR  60
   61 FVNLDFRSYM KFLNWMPEAL KMPEPELIDH AGLDSVVYLR IYWLGLKIFT PIAVLAWAVL 120
  121 VPVNWTNNTL EMAKQLRNVT SSDIDKLSVS NIPEYSMRFW THIVMAYAFT IWTCYVLMKE 180
  181 YETIANMRLQ FVASEARRPD QFTVLVRNVP PDADESVSEL VEHFFLVNHP DHYLTHQVVC 240
  241 NANKLADLVK KKKKLQNWLD YYQLKYARNN SQRIMVKLGF LGLWGQKVDA IEHYIAEIDK 300
  301 ISKEISKERE EVVNDPKAIM PAAFVSFKTR WAAAVCAQTQ QTRNPTQWLT EWAPEPRDVF 360
  361 WSNLAIPYVS LTVRRLIMHV AFFFLTFFFI VPIAFVQSLA TIEGIVKAAP FLKFIVDDKF 420
  421 MKSVIQGFLP GIALKLFLAF LPSILMIMSK FEGFTSISSL ERRAAFRYYI FNLVNVFLAS 480
  481 VIAGAAFEQL NSFLNQSANQ IPKTIGVAIP MKATFFITYI MVDSWAGVAG EILMLKPLIM 540
  541 FHLKNAFLVK TDKDREEAMD PGSIGFNTGE PRIQLYFLLG LVYAPVTPML LPFILVFFAL 600
  601 AYIVYRHQII NVYNQEYESA AAFWPDVHGR VIAALVISQL FLMGLLGTKH AALAAPFLIA 660
  661 LPVLTIGFHH FCKGRYEPAF IRYPLQEAMM KDTLETAREP NLNLKGYLQN AYVHPVFKGD 720
  721 EDDYDIDDKL GKFEDEAIIV PTKRQSRRNT PAPSIISGDD SPSLPFSGKL V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle