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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62319698
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANLLRVLMV AEKPSIALSI ASVLSHGQMS TRGGSTEVHE FDGMFRGFKA HYRVTSVIGH  60
   61 VFSVDFPEKY QNWATIDPQD LFGAPIIKKE SNPKAHICRH LSNEARGCSY MVLWLDCDRE 120
  121 GENICFEVIE STGFDMKDSK RKVYRARFSS VTEKDISKAM DNLVEPNRDE ALAVDARQEI 180
  181 DLKVGVAFSR FQTSYFQGKY QNLDCRVISY GPCQTPTLGF CVQRYMHINT FKPEKFWALR 240
  241 PCIRKDGYEL QLEWERRRLF DLEAATVFQK LVVEGRTAKV MDVSEKQEVK GRPAGLNTVN 300
  301 LLKVASSALG FGPQTAMHLA ERLYTQGFIS YPRTESTAYP SSFDFTDTLR AQVSNPVWGG 360
  361 YVQRLLSDGF HMPKSGTDAG DHPPITPMRA ATEVMVGGVA WRLYQYVCQH FLGTVSPNCK 420
  421 YIRTKVELSI GGETFHCTGQ RVTEKGFTAI MPWSAVDEKK LPSFLKGERI EVLRVELYEG 480
  481 NTAPPDYLTE SELISLMEKH GIGTDASIAV HINNIGERNY VQVQSGRKMV PTALGITLIR 540
  541 GYQCIDPDLC LPDIRSFIEQ QITLVAKGQA DHSHVVQHVI QQFRRKFSYF VQQIEHMDAL 600
  601 FEAQFSPLAD SGRALSKCGK CLRYMKHITA VPPRLFCGTC EEVYYLPQKG TVKLYKELIC 660
  661 PLDNFELVIY SVPGPEGKSF PLCPYCYNSP PFEGIDTLFG ASKTPNAPAK TKTGAGMPCS 720
  721 LCPHPTCQHS VRNQGVCACP ECEGTLVLDP VSFPKWKLNC NLCSCIVLLP EGAHRITTTS 780
  781 NRCPECDSAI IEIDFNKKTT PLENGATLHQ GCVLCDELLL SLVEVKHGRS FVRRGGRGRG 840
  841 RGRGRGRGGR RGSKSVDPKM SFRDF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle