YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CSLG1_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.17
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METHRKNSVV GNILHTCHPC RRTIPYRIYA IFHTCGIIAL MYHHVHSLVT ANNTLITCLL  60
   61 LLSDIVLAFM WATTTSLRLN PVHRTECPEK YAAKPEDFPK LDVFICTADP YKEPPMMVVN 120
  121 TALSVMAYEY PSDKISVYVS DDGGSSLTFF ALIEAAKFSK QWLPFCKKNN VQDRSPEVYF 180
  181 SSESHSRSDE AENLKMMYED MKSRVEHVVE SGKVETAFIT CDQFRGVFDL WTDKFSRHDH 240
  241 PTIIQVLQNS ETDMDNTRKY IMPNLIYVSR EKSKVSPHHF KAGALNTLLR VSGVMTNSPI 300
  301 ILTLDCDMYS NDPATLVRAL CYLTDPEIKS GLGYVQFPQK FLGISKNDIY ACENKRLFII 360
  361 NMVGFDGLMG PTHVGTGCFF NRRAFYGPPY MLILPEINEL KPYRIADKSI KAQDVLSLAH 420
  421 NVAGCIYEYN TNWGSKIGFR YGSLVEDYYT GFMLHCEGWR SVFCNPKKAA FYGDSPKCLV 480
  481 DLVGQQIRWA VGLFEMSFSK YSPITYGIKS LDLLMGLGYC NSPFKPFWSI PLTVYGLLPQ 540
  541 LALISGVSVF PKASDPWFWL YIILFFGAYA QDLSDFLLEG GTYRKWWNDQ RMLMIKGLSS 600
  601 FFFGFIEFIL KTLNLSTPKF NVTSKANDDD EQRKRYEQEI FDFGTSSSMF LPLTTVAIVN 660
  661 LLAFVWGLYG ILFCGGELYL ELMLVSFAVV NCLPIYGAMV LRKDDGKLSK RTCFLAGNLH 720
  721 VGSYCVKLLR PQVTSPLRLI HNNNTSGWFK RKKHNMNESV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle