YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62318522
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGWIGETVDS IKSIQIRQLF TQAISLGMIV TSALIIWKAL MCVTGSESPV VVVLSGSMEP  60
   61 GFKRGDILFL HMSKDPVRAG EIVVFNVDGR DIPIVHRVIK VHERENTGEV DVLTKGDNNY 120
  121 GDDRLLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD 180
  181

Type	Start	End	Confidence
Cytoplasmic	1	18	0.75
Transmembrane Helix	19	41	0.83
Non-Cytoplasmic	42	137	0.69
Transmembrane Helix	138	156	0.65
Cytoplasmic	157	161	0.43
Transmembrane Helix	162	178	0.43
Non-Cytoplasmic	179	180	0.44