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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67971058
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTGLFFLCI LGTAAAIPTH ARLLSDHAKP TAEMVAPDNT AIPNLRAEDA ENEKETAVSP  60
   61 EDHSHRKAEK SSVLKSKEES HEQSAEQGKS SSQELGLKDQ EDRDGDFSVN LEYAPTEGIL 120
  121 DIKEDMSEPQ EKKPSENTDF LAPGVSSFID SNQQESITKR EENQEQPRNY SHHQLNKSSK 180
  181 HSQDLRDQGN QEQDPNISNG EEEEEKEPGE VGTHNDNQEG KTELPREDAN SKREEDNTQS 240
  241 DDILEESDQP TQVSKMQEDE FEQDNQEQED DNSNAETEEE NASNINKHIQ ETEWPSQEGK 300
  301 TGLEAISNHK EIDEKTVSEA LLMEPTEDGT TMPRNHGADD DGGDDSDDGP RHSAGDDYFI 360
  361 PSQAFLEAER AQSIAYHLKI EEQREKAHEN ENIDTSELGE HQEAKKAENS SNDEETSSEG 420
  421 NMRVHGVDSC MSFQCKRGHI CKVDQQGKPH CVCQDPVTCP PTKLLDQVCG TDNQTYASSC 480
  481 HLFATKCRLE GTKKGHQLQL DYFGACKSIP TCTDFEVTQF PLRMRDWLKN ILMQLYEANS 540
  541 EHAGYLNEKQ RNKVKKIYLD EKRLLAGDHP IDLLLRDFKK NYHMYVYPVH WQFSELDQHP 600
  601 MDRVLTHSEL APLRASLVPM EHCITRFFEE CDPNKDKHIT LKEWGHCFGI KEEDIDENLL 660
  661 F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle