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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|86476054, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTFTLPASV LFCFLLLIQG LGAAPPGRPD VFPPPLSSEH NGQVAEDAVS RPKDDGVPEV  60
   61 RAARNPEPQD QGELFQGVDP RALASVLLQA LDRPASPPSV PGGSQQGTPE EAAEALLTES 120
  121 VRSQTHSLPA PEIQAPAVAP PRPQTQDRDP EEDDRSEELE ALASLLQELR DFSPSNAKRQ 180
  181 QETAAAETET RTHTLTRVNL ESPGPERVWR ASWGEFQARV PERAPLPPPV PSQFQARMSE 240
  241 SAPLPETHQF GEGVSSPKTH LGETLTPLSK AYQSLGGPFP KVRRLEGSFL GGSEAGERLL 300
  301 QQGLAQVEAG RRQAEATRQA AAQEERLADL ASDLLLQYLL QGGARQRDLG GRELQETQQE 360
  361 RENEREEEAE QERRGGGEDD VGEEDEEAAE AEAEAEEAER ARQNALLFAE EEDGEAGAED 420
  421 KRSQEEAPGH RRKDAEGAEE GGEEDDDDEE MDPQTIDSLI ELSTKLHLPA DDVVSIIEEV 480
  481 EEKRKRKKNA PPEPVPPPRA APAPTHVRSP QPPPPAPARD ELPDWNEVLP PWDREEDEVF 540
  541 PPGPYHPFPN YIRPRTLQPP ASSRRRHFHH ALPPARHHPD LEAQARRAQE EADAEERRLQ 600
  601 EQEELENYIE HVLLHRP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle