YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71892460, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATPGSGSSR RLVQYVIVRS DLIHSLSWPL GAVITQACHA ATAAIHLHYS DPDTQQYLAE  60
   61 LDSMHKVVLQ APDEASLSTL SSTLEEKDIA HKLWMEQPEN IPTCLALKPY PKETVQPYLK 120
  121 KFKLFK

Type	Start	End	Confidence
Signal Peptide	1	40	0.50
N-region	1	31
H-region	32	37
C-region	38	40
Cleavage Site	40	41
Non-Cytoplasmic	41	126	0.97