YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CNPY1_DANRE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPWIKHICL VLVAAFMLVK TTESKKDEAL YCSACMAIAD EINYSISQTD PKKMIHVGGF  60
   61 RLKPDGSLTD KKVPLARSET YLTELLEEVC KSMSDYALYE NPDTKEKSYK RFAPRDNDGG 120
  121 NFPDFKNFKF DGPESSSALK FACESIVEEL EDDIISLFAS DSDHVAKTLC SEVSDHCKSS 180
  181 VFQHSEL

Type	Start	End	Confidence
Signal Peptide	1	24	0.98
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	187	0.99