YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|66730457, gi\|...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.78
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWPPLYWLC MLGTLVGLLA TPAPNNCPDR HYWIGAGLCC QMCGPGTFLV KHCDQDRAAA  60
   61 QCDPCIPGTS FSPDYHTRPH CESCRHCNSG FLIRNCTVTA NAECTCSKGW QCRDQECTEC 120
  121 DPPLNPALTS QPSEAPSPQL PPPTHLPYAT EKPSWPPQRQ LPDSTVYSRL PSQRPLCSSD 180
  181 CIRIFVTFSS MLLVFVLGGI LFFHQRRNHG PNEDSQAVPE ELCPYSCPRE EEGSVIPIQE 240
  241 DYRKPEPASY P

Type	Start	End	Confidence
Signal Peptide	1	22	0.80
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	181	0.83
Transmembrane Helix	182	203	0.90
Cytoplasmic	204	251	0.79