YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|58270880, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRLPSGPTQ AFPAGAMTPA QAYQASQGYP TSSVAFPRPS TASPAIPTQA TQNIGTPFDP  60
   61 SSSVTSFSTT NSATSRIPTS TSITSFHKPT SQSPSLAETS KERSATPDYI GKMGQLASRS 120
  121 PAASPTYDTA SSPTTPTVDM SFHPRASTDS TVSLPLALHT TESLPPGARR GYENRSTSFS 180
  181 GSSREIIRPL SNPAARLSNP QAQSQTRAPL PSLYPAILSM VSAAFKSYIP LADLTKDGIT 240
  241 YKDSFSGQAA VTLIAELIKT SDRNLALLLG RSLDAQKFFH DVTYDHRLRD NPKEVYRFKD 300
  301 RLAAPFTDTN GNGESPVSEG RLTRNGSGAS STAMGLGGGL KALTAARPAD SSSSMHTEST 360
  361 PVSMTPSRSS TMPFLDSDSP DGLDSEDTLP VGVFTLLTDC YSPTCSRDSL CYSINCPRRL 420
  421 EQMKRLNMKP EPGLNRKLSR ESLVDVKETG TLWIHSVSQE ILDSVDDKEK KRQEAINEVI 480
  481 YTERDFVRDL EYLRDSWVKP LRTQEVIDAK RRDDFVRQVF WNVHDVLSVN HVLAERLTKR 540
  541 QKKEPVVSRI GDIFLERVPL FEPFVTYGAH QLFGKYEFEK EKGANPVFQK FVDDTERKPE 600
  601 SRKLELNGYL TKPTTRLGRY PLLLEAVLKY TPDDHPDKED LPEVIKMIRG FLTKVNAESG 660
  661 KSENIFELAQ IEQQLVFRPN ERIDLRLRDK NRQLVHKGPL KRRGGNREEI ADLLGFLFDH 720
  721 AFLLVKPKWV NKSEQYKVYR RPIPLELLVL VTPDEQYNSG KLSYGHGRSR LITRHPNSKT 780
  781 NHSSQNNSIT APPKPESKHG FSITILHLGK KGYSMQLWVD THIGRKKWLE NIDKQQGLLR 840
  841 EKSTVFVSET ITEGILSGVR KVNCSSPYDQ GNRMIFGTDE GVYFANLRDE KLREPVKVIN 900
  901 LIDVTQVDVI EEFQLLIVLH ERCVTTFPLD SLDPSDPNAA LKRGKRISSH TSFIKSGVCL 960
  961 GKTLVAIVKS STLSSTIKVM EPVDLSQNRK KTQAGFMKRL NGKDDALKLF KEFYIPTESS1020
 1021 SVHFLKTKLC VGCTKGFEIV DLETLDMQGL LDPSDGSLDF VLKRDNVRPI AIYRIEEDFL1080
 1081 LCYDEFAFYV NKNGWRSRPK WAIVWEGIPT SFALQYPYVI AFEPTFIEVH HVETGHLVQI1140
 1141 IPGNNIQCLF ADTPPSRVNA PLPPNRMMYA PPTLGTPPYA RPPNMPGYPA YPNVSYPGHP1200
 1201 QQPRQTSNGA YPPHRINQAP SAGVRHPQQT PMGYGMPAPH PPPLMNRFAR PQVVFVSDDS1260
 1261 HVQFLKFPPA SHSHPQRPVM THYQTAPAGH SARSSR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle