YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CR19B_DANRE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRLWAPVTL RRVLLLRSVY LPHSWAMQEP RLAVLSPRYF SCTNAIRAKE AHKTSTEEQE  60
   61 EVPLNPPQSL AGTEGLYKAD SEPVPHNKGD IDPLQDKSIG IFQRFKKTFK QYGKVMVPVH 120
  121 IVTSTVWFGS FYYAAMKGVN LVPFLEFIGL PDWIVGILRD SQGGYALTAY AMYKLATPAR 180
  181 YTVTMGGTSL SVQYLRKHGY LSTPPPVKEF LQDKMEETRE LLTEKMEETK ERFSEKMEET 240
  241 KELLSERMEE TKERFSETKD KFSEKLQETK DKMSFRKKAD

Type	Start	End	Confidence
Signal Peptide	1	26	0.71
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	280	0.89