YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56971793, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHTIKLLLFV VPLVISSRVD PDLSPFDSVP SEPKSRFAML DDVKILANGL LQLGHGLKDF  60
   61 VHKTKGQIND IFQKLNIFDQ CFYDLSLQTN EIKEEEKELR RTTSKLQVKN EEVKNMSLEL 120
  121 NSKLESLLEE KMALQHRVRA LEEQLTSLVQ NPPGAREHPE VTSLKSFVEQ QDNSIRELLQ 180
  181 SVEEQYKQLS QQHIQIKEIE NQLRKTGIQE PTENSLYSKP RAPRTTPPLH LKEAKNIEQD 240
  241 DLPADCSAIY NRGEHTSGVY TIRPSSSQVF NVYCDTQSGT PRTLIQHRKD GSQNFNQTWE 300
  301 NYEKGFGRLD GKVISLHHSL IC

Type	Start	End	Confidence
Signal Peptide	1	21	0.95
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	322	0.99