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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67677889
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSMECGLRL KWLILALICP LTAGAPSREG SCPEENLDIA GGSFTLSNGY SDGSYLQYIC  60
   61 PDEHYPSISS RRCQFGVWTP KASSRKKAEC KKITCPNPRV LENGEVAPYQ ERYYINDVTT 120
  121 YSCSSDYKFR GSKVRVCQPN GKWNGSTPIC GRDSDHCPDP GVPPGSSRTG SIFNIDDEVT 180
  181 YHCDSPLTLI GSKVRKCLDD GQWSGTEPQC YADFTYDTAM EAAEAFGNSL TTTLTVQQGF 240
  241 EDDQHGKKIS LDRGGKLDIY IAVDASDSID PKDFDKAKKI IKTLIEKISY YEVSPNYEIL 300
  301 MFATDVDQIV KMRDFKTNEK ARNIVKVFED LDNFNYDKKG DRTGTNIAKL YLKILDSMSL 360
  361 EQVQNKEDFL QTQHVIIVFT DGQANMGGNP KPKVDLIKNL VIKNNASREN KLDLYVFGVG 420
  421 KDVKKEDMNG LVSEKKDERH FFKLPDLDEV QNTFDLMLDD STVVGLCGMQ QNYDGSNKRS 480
  481 AYPWLAQLSI AQSQISDCMG SLVTSRYILT AAHCFKEGDT PDKITVYLEK NTDVKVEKVF 540
  541 IHPNYSLTAK QSIGIKEFYD FDVALLQLKT PVKMSVNLRP ICLPCTKETN RALKLSDSQG 600
  601 TCEKHEQILL SNELVDAAFT SKMDMEKRSP RKIRRITVKL GKYLDACVED AKKAKGIEVA 660
  661 DATEAVTKNF LCSGGNQPQR DDVSCKGESG GATHVDKYGR LIQIGVVSWG VKNLCSKAKL 720
  721 DAVSVSDSRD YHINLLRPDI QSFLKKHLEN DKLGHTLTFL P

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle