YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GLO2_BOVIN
Protein type:	Transmembrane
Type Confidence:	0.56
Topology Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLGRGLLGR WSVAELGAVC ARLGLGPALL GSLHHLGLRK SLTVDQGTMK VELLPALTDN  60
   61 YMYLLIDEDT KEAAIVDPVQ PQKVVETARK HGVKLTTVLT THHHWDHAGG NEKLVKLEPG 120
  121 LKVYGGDDRI GALTHKVTHL STLQVGSLHV KCLSTPCHTS GHICYFVTKP NSPEPPAVFT 180
  181 GDTLFVAGCG KFYEGTADEM YKALLEVLGR LPADTRVYCG HEYTINNLKF ARHVEPDNTA 240
  241 VREKLAWAKE KYSIGEPTVP STIAEEFTYN PFMRVREKTV QQHAGETEPV ATMRAIRKEK 300
  301 DQFKMPRD

Type	Start	End	Confidence
Cytoplasmic	1	12	0.45
Transmembrane Helix	13	31	0.48
Non-Cytoplasmic	32	308	0.94