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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|86568905, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIFQPKGDS FGSLNETVQS RRLIVSRYRS LRERQWALLV LCTGALAIVI DTSIVNVALP  60
   61 SIGQDLGFSA AGLSWVVNAY LIPFGGLLLF AGRLGDLVGA KRMFLAGIAL FTPASLVCGL 120
  121 AQNPETLVAA RFVQGVGGAL AAAVVLGLVV STFPNAIEQA KAIGLYAFVS SAGAALGLLL 180
  181 GAWITEALSW HWTFFINVPL GLLVLPLGAR LVDDERVVLD DRSIDVPGVL LITSGLMLTV 240
  241 YTIVRFADGA TPLTWALVGI SAALLAAFVV RQRTARNPLV PLSIFRARNV AWANMVQALM 300
  301 IAGMGGMFFL GTLYLRQVLG LSAMEVGLAF LPTALMVAVI SLKATPRLME KIDPKTVLVP 360
  361 GLLLITAGLA LLAVAPADGD YWRDVLPAMV LLGAGAGLGY PSSLTMVMAD ATAADRGLRS 420
  421 GLVNTTQQVG PAIGLAVLAT VAADRTTTLV SRGSTHAEAL TGGYHLAFWI GSGASLVALV 480
  481 LTVLFLRPAV PTSVPKTLDR ARASQRLTQD HTGLSDPDFL ALGLGGTNMM AMLWSVAMGR 540
  541 RAVGVELRGS PYVSVMRWTM REEIYHHLAM IDSMMLERYG EDLLPRLGDG RPFRLADCFF 600
  601 SRHTRAGSVR GDEVVTGFES DAHIGGLARH YETIDDRYRE GRAHREINVL DPLEGPEGLD 660
  661 PAALEHDLSD VLGSQSMFQV GAEELLVMLR RYLEGLEQID RDRGEALPRV RVLPYHRVAT 720
  721 SESSDRERRW LPSALRRTPV AERGFERTAD GRVRVRVEAV RELDYRGAFR RVRVPYSETV 780
  781 DLGTPGLIMI AEGLDSPDAA RLGFRQETVC VDRGDGRGPV PAEADFLVGN VDIYLADRIR 840
  841 VRRASEFDQA GNEYWVHQRC VGHEEDAQIG WTMLEVPPYK TFDPIQAGLV PAGTPKDSKP 900
  901 YFAGHQFLLR RYFLDQTAQL TEIPRRAIEY NQLSYGPKLF TVTERIGLDA LVAANAVVAG 960
  961 DSFGNSHHLT SGGINTGMLG HGLRVLRYWQ ARESGSSASD AARDLADGIR ADTRALIDLC1020
 1021 EQDFRAAPPA APPRKQQRLL AGATRQRRSI FPQRYPDEWS RIQLRTGKIF AYNLPMLDPE1080
 1081 HPDTREAQPV GAMSGAPPSA SERKDPLGAA RA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle