YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|86566489, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPITYSLVT PMQPASRAVS TVLRLGLGVV WLVAGLLKVN DPDGMVRSVR AFRILPDALV  60
   61 QPIAYGVPFL EIALGMLLVV GLAVRLSAVV SAVMFAVYIA AIASAATRGL RIDCGCFSSG 120
  121 GDLTADAPTH YTSELIRDSL LLAAAGLLAW RPSGYLAVDR LLDQPVNDLS GSTADGCEVE 180
  181 EGTVDDRR

Type	Start	End	Confidence
Cytoplasmic	1	19	0.57
Transmembrane Helix	20	39	0.87
Non-Cytoplasmic	40	68	0.50
Transmembrane Helix	69	102	0.77
Cytoplasmic	103	188	0.79