YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|86566282, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGREQPVLS LGGKYRSGSP VVRHRQTRSP VQVLVHEMGK FGLVGGACYA IDFLVSNLCH  60
   61 TLLGMGPLSA KTVSTVVAAT FSYIGNRQWS FNHRARTGLR REYTLFVILN TVGLLIALGC 120
  121 LGFARYVLDL KGVLAFNLFG NIIGTGLGTV FRFWAYKKWV FLHPDHPKAA TSCGARQDGR 180
  181 RHIPEHAGRI

Type	Start	End	Confidence
Cytoplasmic	1	32	0.91
Transmembrane Helix	33	55	0.67
Non-Cytoplasmic	56	66	0.53
Transmembrane Helix	67	85	0.81
Cytoplasmic	86	104	0.89
Transmembrane Helix	105	126	0.95
Non-Cytoplasmic	127	132	0.84
Transmembrane Helix	133	155	0.91
Cytoplasmic	156	190	0.98