YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|86574773, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKEIRPAIV SFAALACLTG LIYPLAMTGI AQVAFPTQAN GSLITQNNQV IGSALIGQSF  60
   61 TEPKYFHGRP SATTAPDPQD PAKSVPAPYN AANSMGSNLG PTSKALADRL ASDMAALKQE 120
  121 NPGAAVPVDL VTTSGSGLDP DVSPEAALFQ VPRVAKARNL PEARVRALVE SQATGRDLGV 180
  181 LGEPRVNVLK LNLALDKMQA QNQPGS

Type	Start	End	Confidence
Signal Peptide	1	28	0.74
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	206	0.98