YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|86750069, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLSDGPERL QATVEAAIGK HWKAYLVEGI LLLVFGFAAI LLPLLASLAI TILLGWLFLV  60
   61 SGIAGLAFSF WARQAPGFWW SLASAILAVI AGIVVISMPV EITVTLTLVI GIYFLAEGVA 120
  121 TIMYALQHRG RLSERWGWML AAGVLDILVA FIIISGWPGT AAWAVGLLVG INLVFGGTSL 180
  181 IAMALAARNK AS

Type	Start	End	Confidence
Cytoplasmic	1	20	0.98
Transmembrane Helix	21	42	0.88
Non-Cytoplasmic	43	48	0.62
Transmembrane Helix	49	71	0.89
Cytoplasmic	72	77	0.85
Transmembrane Helix	78	98	0.94
Non-Cytoplasmic	99	103	0.79
Transmembrane Helix	104	126	0.91
Cytoplasmic	127	135	0.92
Transmembrane Helix	136	156	0.94
Non-Cytoplasmic	157	162	0.74
Transmembrane Helix	163	186	0.90
Cytoplasmic	187	192	0.92