YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|86570683, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPASPAARS ALRSGIISAA ATGCLAFALL ASPMARAQDA NPVLAKVNGA EIRQSDVTLA  60
   61 EEELGPSLAQ MDPATKKENV LSFLIDMKIV AKAAEDKKIA DRAEFKKRLE FARNRLLMDD 120
  121 LLGVEGKAAT TDEAMKKVYE DAAKQISGEQ EVHARHILVE TEDEAKAIAE ELKKGADFAE 180
  181 LAKKKSKDPG ASDGGDLGFF TKDQMVPEFS AVAFALEPGK ISDPVKSQFG WHIIKVEEKR 240
  241 NRKPPTFDQV KPQIEQYVTR KAQSDYVTQL RQAAKVERLD KPAEPAASPA DAAKPAEPAA 300
  301 KAPAKK

Type	Start	End	Confidence
Signal Peptide	1	37	0.99
N-region	1	28
H-region	29	34
C-region	35	37
Cleavage Site	37	38
Non-Cytoplasmic	38	306	0.99