YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|63101799, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSFLGGGLF CAGVGNILLI VSTATDYWMQ YRHSNNYMHQ GLWRYCTPGK CFTHTDSIAY  60
   61 WDATRAFMIL SLLACFIGII IGIMAFIHYS SFDRFDKTFA AGILFFISCF FVFLAMAVYT 120
  121 GVTINYYGKR YGNWRFSWSY IIGWVSVVLT FFSGMFYMCA YRMHECPRSS NPH

Type	Start	End	Confidence
Cytoplasmic	1	6	0.82
Transmembrane Helix	7	28	0.91
Non-Cytoplasmic	29	65	0.90
Transmembrane Helix	66	89	0.91
Cytoplasmic	90	98	0.83
Transmembrane Helix	99	121	0.91
Non-Cytoplasmic	122	139	0.83
Transmembrane Helix	140	161	0.93
Cytoplasmic	162	173	0.92