YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71152773, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSFMGGGLF CAIVGNILLV VSTATDYWMQ YRLSGSFAHQ GLWRYCMSGK CYTQTDSIAY  60
   61 WNATRAFMIL SAMSCFAGII AGILSFAHFS AFERFNRSFA AGIMFFISTL FVLLAMAIYT 120
  121 GVTVNFLGKR FGDWRFSWSY ILGWVALLMT FFSGIFYMCA YRMHECRRVA GTR

Type	Start	End	Confidence
Cytoplasmic	1	6	0.91
Transmembrane Helix	7	28	0.92
Non-Cytoplasmic	29	66	0.94
Transmembrane Helix	67	89	0.93
Cytoplasmic	90	98	0.85
Transmembrane Helix	99	121	0.91
Non-Cytoplasmic	122	139	0.88
Transmembrane Helix	140	161	0.94
Cytoplasmic	162	173	0.96