YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|84995204
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKNKDYKT NNELSSLMDV MLKGGVKVKS AAEVGKRAVQ FTRGDEILKW LMNNKELVYN  60
   61 KCPSFFQNSK LEDNQDVSNF VDNLIENGFM YRAQYQPLEG TLEKSETGSY KRPMWPKRLI 120
  121 RTQKQRFDTV GFYIISYEGS QKWNYLKLCG IIFGIIVSNV YVPSVATVFK ALNVMASIIL 180
  181 RLILFLIMWF CGYDFWLFPN LFDEDLGVVD SFKPLYSFTY RKDNLTMMAC RLLCSILIGV 240
  241 SIYQLGKTHD INDIYKFTKQ SFLDVLDWGH QKLAAPPEET SFYKSLGVDL TTEFKEKGSE 300
  301 EPTEEGEEDD YNCLLGCGFK SLDDLVKNCM TDCDCMSNLL ENSCLRHCPN ETVSSLTEVK 360
  361 IDICKRYKRK QTDL

Type	Start	End	Confidence
Cytoplasmic	1	142	0.74
Transmembrane Helix	143	165	0.73
Non-Cytoplasmic	166	173	0.39
Transmembrane Helix	174	197	0.81
Cytoplasmic	198	374	0.62