YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|66391031, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.57
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGQSNPRFR LLIGWCCLMS SALLMMTVYL ATSSNKQSET NTTTSEHHSS AGPQEKRVQF  60
   61 SELQALNVID YIRLLKDKKK IWICTQPCKS KRLKLNNSSV EIASTGLYHI HAQVGFKRHE 120
  121 STQETKKTPQ KNTINLIKNK GLSAQKKLSE VISFEPGTLR LIRLVKLKEG DSISLDINYQ 180
  181 NQSMSLLEDE YHTYWEIILL NEI

Type	Start	End	Confidence
Cytoplasmic	1	10	0.54
Transmembrane Helix	11	31	0.56
Non-Cytoplasmic	32	203	0.98