YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62897457, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDLLLLGLI GGLTLLLLLT LLAFAGYSGL LAGVEVSAGS PPIRNVTVAY KFHMGLYGET  60
   61 GRLFTESCSI SPKLRSIAVY YDNPHMVPPD KCRCAVGSIL SEGEESPSPE LIDLYQKFGF 120
  121 KVFSFPAPSH VVTATFPYTT ILSIWLATRR VHPALDTYIK ERKLCAYPRL EIYQEDQIHF 180
  181 MCPLARQGDF YVPEMKETEW KWRGLVEAID TQVDGTGADT MSDTSSVSLE VSPGSRETSA 240
  241 ATLSPGASSR GWDDGDTRSE HSYSKSGASG SSFEELDLEG EGPLGESRLD PGTEPLGTTK 300
  301 WLWEPTAPEK GKE

Type	Start	End	Confidence
Signal Peptide	1	25	0.99
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	313	0.98