YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62089438
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSERLVRFRA RGFPRRQADF SSLVFLFAFF LPPPLPPSPS WPSALRPLQG HLYTVPIREQ  60
   61 GNIYKPNNKA MADELSEKQV YDAHTKEIDL VNRDPKHLND DVVKIDFEDV IAEPEGTHSF 120
  121 DGIWKASFTT FTVTKYWFYR LLSALFGIPM ALIWGIYFAI LSFLHIWAVV PCIKSFLIEI 180
  181 QCISRVYSIY VHTVCDPLFE AVGKIFSNVR INLQKEI

Type	Start	End	Confidence
Cytoplasmic	1	17	0.93
Transmembrane Helix	18	36	0.88
Non-Cytoplasmic	37	144	0.91
Transmembrane Helix	145	168	0.82
Cytoplasmic	169	217	0.84