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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62089328
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TESSLSPPRG SSPAWLCVPG HFLRFSGGRS AASRIPRGLG PPSAGGPWSG RAGEAPRLSG  60
   61 GSHGGKNLFN KFTSLLSSFR CAFSDMRRLL EPCWWILFLK ITSSVLHYVV CFPALTEGYV 120
  121 GALHENRHGS AVQIRRRKAS GDPYWAYSGA YGPEHWVTSS VSCGGRHQSP IDILDQYARV 180
  181 GEEYQELQLD GFDNESSNKT WMKNTGKTVA ILLKDDYFVS GAGLPGRFKA EKVEFHWGHS 240
  241 NGSAGSEHSI NGRRFPVEMQ IFFYNPDDFD SFQTAISENR IIGAMAIFFQ VSPRDNSALD 300
  301 PIIHGLKGVV HHEKETFLDP FVLRDLLPAS LGSYYRYTGS LTTPPCSEIV EWIVFRRPVP 360
  361 ISYHQLEAFY SIFTTEQQDH VKSVEYLRNN FRPQQRLHDR VVSKSAVRDS WNHDMTDFLE 420
  421 NPLGTEASKV CSSPPIHMKV QPLNQTALQV SWSQPETIYH PPIMNYMISY SWTKNEDEKE 480
  481 KTFTKDSDKD LKATISHVSP DSLYLFRVQA VCRNDMRSDF SQTMLFQANT TRIFQGTRIV 540
  541 KTGVPTASPA SSADMAPISS GSSTWTSSGI PFSFVSMATG MGPSSSGSQA TVASVVTSTL 600
  601 LAGLGFGGGG ISSFPSTVWP TRLPTAASAS KQAARPVLAT TEALASPGPD GDSSPTKDGE 660
  661 GTEEGEKDEK SESEDGEREH EEDGEKDSEK KEKSGVTHAA EERNQTEPSP TPSSPNRTAE 720
  721 GGHQTIPGHE QDHTAVPTDQ TGGRRDAGPG LDPDMVTSTQ VPPTATEEQY AGSDPKRPEM 780
  781 PSKKPMSRGD RFSEDSRFIT VNPAEKNTSG MISRPAPGRM EWIIPLIVVS ALTFVCLILL 840
  841 IAVLVYWRGC NKIKSKGFPR RFREVPSSGE RGEKGSRKCF QTAHFYVEDS SSPRVVPNES 900
  901 IPIIPIPDDM EAIPVKQFVK HIGELYSNNQ HGFSEDFEEV QRCTADMNIT AEHSNHPENK 960
  961 HKNRYINILA YDHSRVKLRP LPGKDSKHSD YINANYVDGY NKAKAYIATQ GPLKSTFEDF1020
 1021 WRMIWEQNTG IIVMITNLVE KGRRKCDQYW PTENSEEYGN IIVTLKSTKI HACYTVRRFS1080
 1081 IRNTKVKKGQ KGNPKGRQNE RVVIQYHYTQ WPDMGVPEYA LPVLTFVRRS SAARMPETGP1140
 1141 VLVHCSAGVG RTGTYIVIDS MLQQIKDKST VNVLGFLKHI RTQRNYLVQT EEQYIFIHDA1200
 1201 LLEAILGKET EVSSNQLHSY VNSILIPGVG GKTRLEKQFK LVTQCNAKYV ECFSAQKECN1260
 1261 KEKNRNSSVV PSERARVGLA PLPGMKGTDY INASYIMGYY RSNEFIITQH PLPHTTKDFW1320
 1321 RMIWDHNAQI IVMLPDNQSL AEDEFVYWPS REESMNCEAF TVTLISKDRL CLSNEEQIII1380
 1381 HDFILEATQD DYVLEVRHFQ CPKWPNPDAP ISSTFELINV IKEEALTRDG PTIVHDEYGA1440
 1441 VSAGMLCALT TLSQQLENEN AVDVFQVAKM INLMRPGVFT DIEQYQFIYK AMLSLVSTKE1500
 1501 NGNGPMTVDK NGAVLIADES DPAESMESLV 

YRC Informatics Platform - Version 3.0
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