YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62089136
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGVPGAARGP EGWLGSRPGG TGQTNQPRVG SATMPRYGAS LRQSCPRSGR EQGQDGTAGA  60
   61 PGLLWMGLAL ALALALALAL ALSDSRVLWA PAEAHPLSPQ GHPARLHRIV PRLRDVFGWG 120
  121 NLTCPICKGL FTAINLGLKK EPNVARVGSV AIKLCNLLKI APPAVCQSIV HLFEDDMVEV 180
  181 WRRSVLSPSE ACGLLLGSTC GHWDIFSSWN ISLPTVPKPP PKPPSPPAPG APVSRILFLT 240
  241 DLHWDHDYLE GTDPDCADPL CCRRGSGLPP ASRPGAGYWG EYSKCDLPLR TLESLLSGLG 300
  301 PAGPFDMVYW TGDIPAHDVW HQTRQDQLRA LTTVTALVRK FLGPVPVYPA VGNHESTPVN 360
  361 SFPPPFIEGN HSSRWLYEAM AKAWEPWLPA EALRTLRIGG FYALSPYPGL RLISLNMNFC 420
  421 SRENFWLLIN STDPAGQLQW LVGELQAAED RGDKVHIIGH IPPGHCLKSW SWNYYRIVAR 480
  481 YENTLAAQFF GHTHVDEFEV FYDEETLSRP LAVAFLAPSA TTYIGLNPGY RVYQIDGNYS 540
  541 GSSHVVLDHE TYILNLTQAN IPGAIPHWQL LYRARETYGL PNTLPTAWHN LVYRMRGDMQ 600
  601 LFQTFWFLYH KGHPPSEPCG TPCRLATLCA QLSARADSPA LCRHLMPDGS LPEAQSLWPR 660
  661 PLFC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle