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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62088378
Protein type: Transmembrane
Type Confidence: 0.88
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EMAFQKAVKG TILVGGGALA TVLGLSQFAH YRRKQMNLAY VKAADCISEP VNREPPSREA  60
   61 QLLTLQNTSE FDILVIGGGA TGSGCALDAV TRGLKTALVE RDDFSSGTSS RSTKLIHGGV 120
  121 RYLQKAIMKL DIEQYRMVKE ALHERANLLE IAPHLSAPLP IMLPVYKWWQ LPYYWVGIKL 180
  181 YDLVAGSNCL KSSYVLSKSR ALEHFPMLQK DKLVGAIVYY DGQHNDARMN LAIALTAARY 240
  241 GAATANYMEV VSLLKKTDPQ TGKVHVSGAR CKDVLTGQEF DVRAKCVINA TGPFTDSVRK 300
  301 MDDKDAAAIC QPSAGVHIVM PGYYSPESMG LLDPATSDGR VIFFLPWQKM TIAGTTDTPT 360
  361 DVTHHPIPSE EDINFILNEV RNYLSCDVEV RRGDVLAAWS GIRPLVTDPK SADTQSISRN 420
  421 HVVDISESGL ITIAGGKWTT YRSMAEDTIN AAVKTHNLKA GPSRTVGLFL QGGKDWSPTL 480
  481 YIRLVQDYGL ESEVAQHLAA TYGDKAFEVA KMASVTGKRW PIVGVRLVSE FPYIEAEVKY 540
  541 GIKEYACTAV DMISRRTRLA FLNVQAAEEA LPRIVELMGR ELNWDDYKKQ EQLETARKFL 600
  601 YYEMGYKSRS EQLTDRSEIS LLPSDIDRYK KRFHKFDADQ KGFITIVDVQ RVLESINVQM 660
  661 DENTLHEILN EVDLNKNGQV ELNEFLQLMS AIQKGRVSGS RLAILMKTAE ENLDRRVPIP 720
  721 VDRSCGGL

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